DisGeNET - a database of gene-disease associations

List of associated variants

Ankylosing spondylitis, C0038013

Source: GWASCAT ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs35736272	ZPBP2	0.807	0.160	17	39876427	intron variant	T/C	snv		0.35	5
rs259964	ZNF831	0.827	0.120	20	59249254	intron variant	A/G;T	snv			6
rs10761648	ZNF365	0.827	0.120	10	62594503	intron variant	C/T	snv		0.20	5
rs7915475	ZNF365	0.827	0.120	10	62621908	intron variant	A/G	snv		0.28	5
rs1250563	ZMIZ1	0.724	0.240	10	79287626	intron variant	G/C	snv		0.24	14
rs1250550	ZMIZ1	0.851	0.240	10	79300560	intron variant	C/A	snv		0.27	5
rs1250573	ZMIZ1	0.827	0.120	10	79282718	intron variant	G/A	snv		0.23	5
rs140135	ZMAT5 ; UQCR10	0.827	0.120	22	29767846	non coding transcript exon variant	C/G	snv		0.79	5
rs2266961	UBE2L3	0.807	0.160	22	21574308	intron variant	C/G	snv		0.18	6
rs2283790	UBE2L3	0.882	0.120	22	21602364	intron variant	A/G	snv		0.21	3
rs1893592	UBASH3A	0.742	0.280	21	42434957	missense variant	A/C;G	snv	0.27; 8.0E-06		7
rs12720356	TYK2	0.752	0.360	19	10359299	missense variant	A/C;G	snv	6.1E-02; 4.0E-06		7
rs35018800	TYK2	0.790	0.160	19	10354167	missense variant	G/A	snv	4.6E-03	4.9E-03	5
rs7097656	TSPAN14	0.827	0.120	10	80491075	intron variant	T/C;G	snv			6
rs74817271	TNIP1	0.807	0.120	5	151090412	intron variant	G/A	snv		5.0E-02	6
rs4246905	TNFSF15	0.716	0.400	9	114790969	missense variant	T/A;C	snv	0.76		15
rs7848647	TNFSF15	0.732	0.320	9	114806766	upstream gene variant	T/C	snv		0.74	6
rs6478109	TNFSF15	0.752	0.320	9	114806486	upstream gene variant	A/G	snv		0.74	2
rs3810936	TNFSF15	0.742	0.320	9	114790605	synonymous variant	T/C	snv	0.71	0.75	1
rs1077667	TNFSF14	0.925	0.120	19	6668961	intron variant	C/G;T	snv			1
rs6062496	TNFRSF6B ; RTEL1-TNFRSF6B	0.827	0.120	20	63697746	intron variant	G/A	snv		0.52	6
rs1860545	TNFRSF1A	0.790	0.200	12	6337611	intron variant	G/A	snv		0.31	5
rs1800693	TNFRSF1A	0.776	0.360	12	6330843	non coding transcript exon variant	T/C	snv	0.36; 4.0E-06	0.38	3
rs4149577	TNFRSF1A	0.827	0.280	12	6338356	intron variant	G/A;T	snv			2
rs2234161	TNFRSF14	0.827	0.120	1	2559766	non coding transcript exon variant	C/T	snv	4.1E-05; 0.55	0.58	5